Found inside – Page 118Kim, H.; Awofeso, O.; Choi, S.; Jung, Y.; Bae, E. Colorimetric analysis of ... Barthel, K.U. 3D-data representation with ImageJ, In Proceedings of the ... Found insideRasband, W., Analyse Particles... in ImageJ. http://rsb.info.nih.gov/ij/docs/menus/analyse.html#ap. 17. Kamentsky, L., et al., Improved structure, ... Found inside – Page 278ANALYSIS OF IFT USING KYMOGRAMS Protocol: Determine the velocity of IFT particles using ImageJ and. 278 Karl F. Lechtreck 5. Analysis of IFT Using Kymograms ... Found inside – Page 106Image Analysis Image analysis was performed using macros written in-house in ... Then the function “Particle analysis" of ImageJ was applied to identify the ... Experiments are performed with an aortic arch model in a mock cardiovascular system. Fluorescent particles are used to simulate emboli that are released into circulation immediately after carotid compression. Found inside – Page 210Cells are analyzed by first calling ImageJ's particle analyzer and then by performing additional shape recognition. A perpendicular slit-shaped window is ... Found inside – Page 27Analysis. and. Interpretation. With the help of open source software package ImageJ, deformations and strains were calculated based on particle movements in ... This book focuses on the practical aspects of particle size measurement: a major difference with existing books, which have a more theoretical approach. Found inside – Page 22analysis. The subjectiveness of the best-fit procedure hampers the ... (C) Both datasets subjected to imageJ threshold-particle analysis with the plug-in ... Found inside – Page 179Particle. Analysis. Using. Fractal. Techniques. Puja P. More and M. D. Jaybhaye Abstract Wear particle ... Keywords monitoring Wear· ImageJ particle ... Found inside – Page 216Ruberto, C., Dempster, A., Khan, S., Jarra, B.: Analysis of infected blood cell ... http://www.uhnresearch.ca/facilities/wcif/imagej/ particle analysis.htm ... Found inside – Page 200ImageJ, an open-source Java-based image analysis program to count ... As illustrated in Figure 5, particle analysis in ImageJ is a multistage process. Found inside – Page 303.3 Digital analysis of fish-eye lens pictures This phase was developed using AutoCAD, Photoshop, ImageJ, ... using particle analysis in 'ImageJ' (Fig. 7). Found inside – Page 134To automatically analyze particles, the ImageJ software requires a binary image. Therefore, a threshold range is chosen, including all pixels that are ... Found insideParticle Size Analysis Gamma prime particle sizes were measured using ImageJ public domain software [12]. In preparation for this aspect of the work, ... Found inside – Page 230Image analysis was conducted using the program ImageJ and the inbuilt measure and particle analysis tools. The measure tool was used to determine the ... This volume explores open-source based image analysis techniques to provide a state-of-the-art collection of workflows covering current bioimage analysis problematics, including colocalization, particle counting, 3D structural analysis, ... Found inside – Page 298From the 8-bit dot image, a summated dot area, which represents the total actin area, was obtained through particle analysis using ImageJ. Found insidePARTICLE. ANALYSIS. Characterization of a population of granular objects is needed for ... MATLAB, ImageJ, FIJI, etc., are available for particle analysis. Found inside – Page 357Count the total number of isolated signals in ImageJ using the particle analysis counter program (Analyze ->analyze particles) (Fig. 30.1). Found insideThis Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. Found inside – Page 416From the 8-bit dot image, a summated dot area, which represents the total actin area, was obtained through particle analysis using ImageJ. Found inside – Page 261Then, particle analysis was carried out in ImageJ to count particles larger than 1 μm2. It was determined that the day 0 gel images contained 178 ± 34 ... Found inside – Page 48... the main assumption in the scaling model analysis is that the micelle ... of each micelle was determined in ImageJ by running a particle analysis; ... Found inside – Page 34510 ө t A B cluded from the analysis , since no valuable information can be expected . In one software approach we determined the cell count by particle analysis in ImageJ ( 7 ) . After noise reduction using ImageJ's mean filter ( an isolated bright ... Found inside – Page 493This analysis sequence yields a fluorescence profile for each C1 –C4 ROI, to which unique ... analysis by using the “Particle analysis” function of ImageJ. Found insideThe text is supported by practical examples and carefully constructed chapter-ending exercises drawn from the authors' years of teaching experience, including easily adaptable Java code and completely worked out examples. Found insideBasic ImageProcessing with ImageJ Image reading/writing Opening images with a certain ... Imagefiltering inthe frequency domain Particle analysis Summary 4. Found inside – Page 244Afterwards NF200-immunopositive axonal profiles within the ROI were detected by using the particle analysis function of ImageJ. To avoid the detection of ... Found inside – Page 49The Extended Particle Analyzer is based on ImageJ command Analyze Particles and allows to restrict particle analysis in accordance with many parametric ... Found inside – Page 16Z-stack images were analyzed and converted to maximum intensity projections ... (puncta) were counted automatically using ImageJ (particle analysis set to a ... Found inside – Page 72Such images were analysed using ImageJ software (US National Institutes of Health, ... Capillary-Based Particle Trapping and Reactions Prior to performing ... Found inside – Page 2072.5.1 Speed analysis Kymographs or particle tracking algorithms can both be ... time-lapse should be created to identify CESA trajectories using ImageJ. Found inside – Page 20Figure 9 depicts the steps taken to measure nanoparticles form the SEM image. Fig. 9. ImageJ particle analysis of CVD 11-1 nm silver layer. Found inside – Page 201[CrossRef] [PubMed] Kumari, R.; Rana, N. Particle size and shape analysis using Imagej with customized tools for segmentation of particles. Found inside – Page 151Thresholding particles ImageJ is a freely available tool to fulfill routine ... will then analyze the brightness values of all pixels within an interval ... Found inside – Page 15... to carry out with automated image acquisition and particle analysis. ... 9 Schematic illustration of ImageJ particle shape measurement capabilities. Found inside – Page 349This method, which subjects blood images to automatic thresholding and particle analysis, uses ImageJ, a Java-based open source software tool, developed at ... Found inside – Page 107each particle size were as follows: SiO2 -NP 70 nm: water (24.5 mL), ... NPs (>300 particle count) was determined using particle analysis software (ImageJ, ... Found inside – Page 61Maximum stack projections were analyzed using ImageJ 1.51 (NIH). ... using a trainable segmentation function in ImageJ, followed by particle analysis, ... Found inside – Page 98In Chapter 9, Creating ImageJ Plugins for Analysis, we will look at an implementation of particle analysis in a time series. After clicking on OK, ... Found inside – Page 282ImageJ plug-ins ImageJ software package allows almost complete data analysis ... detection and analysis of object (herein called particle) trajectories as ... Found inside – Page 325by SEM analysis to quantify the particle size and particle shape. ... Once in the binary form, the ImageJ particle analysis algorithm was used to calculate ... Found inside – Page 509be temporarily occluded, form unwanted agglomerates with other particles, or even be affected ... or in tools such as the ImageJ plugin ParticleTracker [3]. Found inside – Page 72The ImageJ mosaic particle tracking software [8] was used to capture the particle locations and trajectories. From this analysis an in-house matlab script ... Found inside – Page 93To measure aggregate area, ImageJ particle analysis was used (Ullrich et al., 1996). The measurement scale (in microns) was defined on the image projection, ... Found inside – Page 122... using an image analysis software such as ImageJ (http://rsbweb.nih. gov/ij/). ... using ImageJ plugins including: (i) raw image, (ii) particle analysis, ... Found inside – Page 284The RBS analyses revealed that no notable out-diffusion of Ag atoms occurs ... the Gatan digital microscope and ImageJ particle analysis software packages. Found insideIt was determined by applying ImageJ's particle analysis on the inverted skeletonized binary image. Edge-touching particles were excluded. Analysis of imagej particle analysis 11-1 nm silver layer a certain... Imagefiltering inthe frequency domain particle analysis was used ( et. This analysis an in-house matlab script... found insidePARTICLE a threshold range chosen...... 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